Opened 7 years ago
Last modified 7 years ago
#1728 closed defect
Petascope_If Petascope cannot connect to rasserver at start, it should ignore this error — at Initial Version
Reported by: | Bang Pham Huu | Owned by: | Bang Pham Huu |
---|---|---|---|
Priority: | critical | Milestone: | 9.6 |
Component: | petascope | Version: | development |
Keywords: | Cc: | Dimitar Misev, Vlad Merticariu | |
Complexity: | Medium |
Description
On Centos 7 VM with SELinux enabled, Petascope cannot connect to rasserver. However, it seems because of this error, then, Petascope doesn't continue with try to create new petascopedb when it doesn't exist and it leads to the error with Hibernate.
Full stack trace:
ApplicationMain@178: Failed initializing type registry from rasdaman. org.odmg.ODMGRuntimeException: RasManager Error: Could not connect to RasServer . at org.rasdaman.rasnet.communication.RasRasnetImplementation.connectClient(RasRasnetImplementation.java:385) at org.rasdaman.rasnet.communication.RasRasnetImplementation.setUserIdentification(RasRasnetImplementation.java:364) at rasj.RasImplementation.setUserIdentification(RasImplementation.java:306) at petascope.util.ras.RasUtil.executeRasqlQuery(RasUtil.java:95) at petascope.util.ras.RasUtil.executeRasqlQuery(RasUtil.java:243) at petascope.util.ras.RasUtil.executeRasqlQuery(RasUtil.java:77) at petascope.util.ras.TypeRegistry.initializeStructRegistry(TypeRegistry.java:277) at petascope.util.ras.TypeRegistry.initializeRegistry(TypeRegistry.java:198) at petascope.util.ras.TypeRegistry.getInstance(TypeRegistry.java:57) at org.rasdaman.ApplicationMain.initConfigurations(ApplicationMain.java:176) at org.rasdaman.ApplicationMain.init(ApplicationMain.java:95) at org.rasdaman.ApplicationMain.placeholderConfigurer(ApplicationMain.java:126) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:162) at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:588) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1173) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1067) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) at org.springframework.context.support.PostProcessorRegistrationDelegate.invokeBeanFactoryPostProcessors(PostProcessorRegistrationDelegate.java:149) at org.springframework.context.support.AbstractApplicationContext.invokeBeanFactoryPostProcessors(AbstractApplicationContext.java:686) at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:524) at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122) at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:737) at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:370) at org.springframework.boot.SpringApplication.run(SpringApplication.java:314) at org.springframework.boot.web.support.SpringBootServletInitializer.run(SpringBootServletInitializer.java:151) at org.springframework.boot.web.support.SpringBootServletInitializer.createRootApplicationContext(SpringBootServletInitializer.java:131) at org.springframework.boot.web.support.SpringBootServletInitializer.onStartup(SpringBootServletInitializer.java:86) at org.springframework.web.SpringServletContainerInitializer.onStartup(SpringServletContainerInitializer.java:169) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5623) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:145) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:899) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:875) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:652) at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:1092) at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1984) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748) WARN [2018-04-13 14:11:58] JdbcEnvironmentInitiator@132: HHH000342: Could not obtain connection to query metadata : FATAL: database "petascopedb" does not exist WARN [2018-04-13 14:11:58] AnnotationConfigEmbeddedWebApplicationContext@550: Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Invocation of init method failed; nested exception is org.hibernate.service.spi.ServiceException: Unable to create requested service [org.hibernate.engine.jdbc.env.spi.JdbcEnvironment] ERROR [2018-04-13 14:11:58] SpringApplication@815: Application startup failed org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Invocation of init method failed; nested exception is org.hibernate.service.spi.ServiceException: Unable to create requested service [org.hibernate.engine.jdbc.env.spi.JdbcEnvironment] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1628) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:555) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197) at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1081) at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:856) at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542) at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122) at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:737) at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:370) at org.springframework.boot.SpringApplication.run(SpringApplication.java:314) at org.springframework.boot.web.support.SpringBootServletInitializer.run(SpringBootServletInitializer.java:151) at org.springframework.boot.web.support.SpringBootServletInitializer.createRootApplicationContext(SpringBootServletInitializer.java:131) at org.springframework.boot.web.support.SpringBootServletInitializer.onStartup(SpringBootServletInitializer.java:86) at org.springframework.web.SpringServletContainerInitializer.onStartup(SpringServletContainerInitializer.java:169) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5623) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:145) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:899) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:875) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:652) at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:1092) at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1984) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748) Caused by: org.hibernate.service.spi.ServiceException: Unable to create requested service [org.hibernate.engine.jdbc.env.spi.JdbcEnvironment] at org.hibernate.service.internal.AbstractServiceRegistryImpl.createService(AbstractServiceRegistryImpl.java:264) at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:228) at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:207) at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:51) at org.hibernate.boot.registry.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:94) at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:237) at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:207) at org.hibernate.boot.model.process.spi.MetadataBuildingProcess.handleTypes(MetadataBuildingProcess.java:352) at org.hibernate.boot.model.process.spi.MetadataBuildingProcess.complete(MetadataBuildingProcess.java:111) at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.metadata(EntityManagerFactoryBuilderImpl.java:847) at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.build(EntityManagerFactoryBuilderImpl.java:874) at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:60) at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:353) at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:370) at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:359) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1687) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1624) ... 29 more Caused by: org.hibernate.HibernateException: Access to DialectResolutionInfo cannot be null when 'hibernate.dialect' not set at org.hibernate.engine.jdbc.dialect.internal.DialectFactoryImpl.determineDialect(DialectFactoryImpl.java:100) at org.hibernate.engine.jdbc.dialect.internal.DialectFactoryImpl.buildDialect(DialectFactoryImpl.java:54) at org.hibernate.engine.jdbc.env.internal.JdbcEnvironmentInitiator.initiateService(JdbcEnvironmentInitiator.java:137) at org.hibernate.engine.jdbc.env.internal.JdbcEnvironmentInitiator.initiateService(JdbcEnvironmentInitiator.java:35) at org.hibernate.boot.registry.internal.StandardServiceRegistryImpl.initiateService(StandardServiceRegistryImpl.java:88) at org.hibernate.service.internal.AbstractServiceRegistryImpl.createService(AbstractServiceRegistryImpl.java:254) ... 45 more
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